Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs77789667 | chr14:59940418 | T/G | 0.000243 | 214 | 16.45 | 14.58 | 6.63 | KM Plot |
| KIRP | rs77803510 | chr10:75049446 | G/C | 4.52E-12 | 214 | 16.53 | 11.77 | 5.6 | KM Plot |
| KIRP | rs77819744 | chr5:96216399 | GA/G | 0.000668 | 209 | 18.25 | 13.1 | 7.67 | KM Plot |
| KIRP | rs77888996 | chr8:30030994 | C/T | 1.48E-6 | 210 | 15.88 | 14.87 | 0.33 | KM Plot |
| KIRP | rs77953261 | chr15:24763910 | T/C | 7.05E-7 | 211 | 16.43 | 17.87 | 9.77 | KM Plot |
| KIRP | rs78033682 | chr11:35000849 | G/C | 0 | 213 | 16.43 | 13.97 | 3.83 | KM Plot |
| KIRP | rs78051868 | chr17:80802830 | C/T | 9.36E-5 | 211 | 15.1 | 18 | 15.15 | KM Plot |
| KIRP | rs78113998 | chr11:34827263 | A/G | 0 | 213 | 15.2 | 17 | 3.83 | KM Plot |
| KIRP | rs78121317 | chr1:87676852 | G/A | 0.000217 | 212 | 14.83 | 26.2 | 9.25 | KM Plot |
| KIRP | rs78164170 | chr17:80814209 | C/T | 8.36E-5 | 214 | 15.33 | 17.2 | 15.15 | KM Plot |
| KIRP | rs78236866 | chr11:34774031 | G/C | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs78251067 | chr10:63365688 | T/G | 0 | 210 | 18 | 9 | 3.93 | KM Plot |
| KIRP | rs78259397 | chr1:48768920 | A/C | 3.49E-7 | 213 | 14.85 | 19.87 | 11.03 | KM Plot |
| KIRP | rs78292943 | chr10:63457808 | A/T | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
| KIRP | rs78386763 | chr16:4525477 | A/T | 3.36E-6 | 213 | 16.45 | 15.95 | 10.83 | KM Plot |